The number of publications, along with the organization of new conferences are a couple of the relevant elements that usually indicate the progress of an area of study over the years. This is definitely true in the case of the Enterprise Architecture (EA) discipline, which went from having its first journal article published in 1989 to over two hundred published articles by 2015. But in spite of this evolution, EA is still suffering from a considerable lack of common understanding. It has become very important to investigate the current state of affairs concerning the EA discipline through its relevant publications in order to shed some light on this challenge. 171 journal papers published between 1990 and 2015 were systematically selected and examined in order to accomplish this investigation. The quantitative and qualitative findings of this examination show that EA is a young discipline which raises a growing interest in recent years. This examination also confirms the lack of common understanding in EA, which can be observed in the different descriptions of the term “enterprise architecture,” and in the diversity of perspective with regards to the whole discipline. Several issues related to this lack has been reported, such as multidisciplinary issue, language issue, structure of research and mode of observation issues. The major issue concerns the absence of enough research to shed some light on this challenge. In addition to this investigation, helpful directions for future research in this area was proposed.